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Creating an initial graph

graph_create()
Create the initial graph for a multiple comparison procedure
print(<initial_graph>)
S3 print method for the class initial_graph
plot(<initial_graph>)
S3 plot method for class initial_graph
as_initial_graph() as_graphMCP() as_igraph()
Convert between graphicalMCP, gMCP, and igraph graph classes

Updating a graph

graph_update()
Obtain an updated graph by updating an initial graphical after deleting hypotheses
print(<updated_graph>)
S3 print method for the class updated_graph
plot(<updated_graph>)
S3 plot method for the class updated_graph

Calculating hypothesis weights in a closure

graph_generate_weights()
Generate the weighting strategy based on a graphical multiple comparison procedure

Testing a graphical multiple comparison procedure

graph_test_closure()
Perform closed graphical multiple comparison procedures
graph_test_shortcut()
Perform shortcut (sequentially rejective) graphical multiple comparison procedures
print(<graph_report>)
S3 print method for the class graph_report
graph_rejection_orderings()
Find alternate rejection orderings (sequences) for shortcut tests
adjust_p_bonferroni() adjust_p_parametric() adjust_p_simes()
Calculate adjusted p-values
adjust_weights_parametric() adjust_weights_simes()
Calculate adjusted hypothesis weights

Power simulation

graph_calculate_power()
Calculate power values for a graphical multiple comparison procedure
print(<power_report>)
S3 print method for the class power_report

Example graphs